If you’re hunting for a vibrant, cheesy, and utterly comforting dish to brighten your dinner table, the Zucchini Pesto Bakes Recipe is here to charm your taste buds. Layers of tender zucchini slices generously coated with fragrant pesto and topped with gooey mozzarella and Parmesan cheese make every bite a celebration of fresh, wholesome flavors. Whether you’re cooking for family or friends, this recipe offers a perfect balance of freshness, richness, and subtle spice that brings zucchini to life in a way you’ll want to make time and again.

Ingredients You’ll Need
Getting the ingredients right is key to nailing this dish, and luckily, everything you need is simple yet essential. Each component adds its own magic—whether that’s the bright herbaceous twist from pesto or the melty, savory goodness from the cheeses, all combining to create layers of irresistible texture and flavor.
- 4 medium zucchini, sliced into rounds: Choosing zucchini of similar size ensures even cooking and a pleasing presentation.
- 1/2 cup pesto sauce: Use store-bought or homemade for that fresh, garlicky punch that ties the dish together.
- 1/2 cup grated Parmesan cheese: This brings a sharp, nutty depth to balance the creaminess.
- 1/2 cup shredded mozzarella cheese: Perfect for that luscious, melty, stringy texture everyone loves.
- 2 tbsp olive oil: Essential for greasing the dish and enhancing the zucchini’s natural flavors.
- 1/4 tsp garlic powder: Adds a subtle, savory warmth without overpowering.
- 1/4 tsp red pepper flakes (optional): A pinch for those who crave a gentle kick.
- Salt and pepper to taste: The simple seasoning that makes all ingredients sing in harmony.
- Fresh basil leaves for garnish (optional): Adds a fresh, aromatic finish and a pop of color to your bake.
How to Make Zucchini Pesto Bakes Recipe
Step 1: Prepare Your Baking Dish and Zucchini
Start by preheating your oven to 375°F (190°C) and lightly grease a 9×9-inch baking dish with olive oil or cooking spray. This simple step prevents sticking and adds a hint of richness. Then, slice your zucchini into rounds about a quarter-inch thick; this thickness ensures they hold their shape perfectly while becoming tender during baking.
Step 2: Layer the Zucchini
Arrange half of your zucchini slices in a single layer at the bottom of your dish. Take a moment to season them with salt, pepper, and garlic powder to boost their flavor—this step infuses the zucchini with subtle savory notes that make every bite interesting.
Step 3: Add Pesto and Cheese
Drizzle half of your pesto evenly over the zucchini layer, spreading it gently for full coverage. Follow this with a sprinkling of half the Parmesan and mozzarella cheeses, letting the creamy, sharp flavors meld with the zucchini and pesto.
Step 4: Repeat the Layers
Repeat the process with the remaining zucchini slices, pesto, and cheeses, building a beautiful layered bake that promises bursts of flavor throughout. Cover your dish tightly with foil to lock in moisture and help the zucchini soften while the cheese melts.
Step 5: Bake with Care
Bake covered for 20-25 minutes until the zucchini is tender and the cheese has melted into a bubbly delight. Then, remove the foil and pop it back in the oven for another 5-10 minutes to develop that irresistible golden, slightly crispy top that makes this dish so crave-worthy.
Step 6: Garnish and Enjoy
Once out of the oven, dress your Zucchini Pesto Bakes Recipe with fresh basil leaves if you like—they bring a fresh herbal brightness and gorgeous color contrast. Serve these bakes while hot for the ultimate cheesy, pesto-rich experience.
How to Serve Zucchini Pesto Bakes Recipe

Garnishes
Fresh basil leaves are a dream garnish here, adding a vibrant green freshness that complements the rich pesto and cheese beautifully. A light drizzle of extra virgin olive oil or a sprinkle of toasted pine nuts can also add texture and depth, making your presentation both tasty and inviting.
Side Dishes
This bake pairs wonderfully with crisp green salads, crunchy garlic bread, or even light grain salads like quinoa or couscous to round out your meal with contrasting textures and flavors. The freshness of the sides helps balance the richness of the baked zucchini layers.
Creative Ways to Present
For a charming twist, try serving these zucchini pesto bakes in individual ramekins for personal portions that look adorable at the table. You can also slice the bake into squares and serve them as finger foods or tapas at casual gatherings, instantly elevating your appetizer spread.
Make Ahead and Storage
Storing Leftovers
Leftover zucchini pesto bakes keep beautifully covered in the fridge for up to three days. Place them in an airtight container to preserve moisture and flavor, so you can enjoy the dish’s fresh vibrant taste even the next day.
Freezing
This recipe freezes well, making it a fantastic make-ahead option. After baking and cooling completely, cut into portions and freeze in airtight containers or freezer bags. To reheat, thaw overnight in the fridge for the best texture.
Reheating
Reheat leftovers in the oven or toaster oven at 350°F (175°C) until warmed through and bubbly—about 15-20 minutes. This method helps restore the crispy top and keeps the zucchini tender and flavorful. Microwaving is quicker but may soften the texture a bit.
FAQs
Can I use other types of squash instead of zucchini?
Absolutely! Yellow squash or pattypan squash can be delicious alternatives, offering a slightly different sweetness and texture while complementing the pesto just as well.
Is homemade pesto better than store-bought for this recipe?
Homemade pesto brings a fresh, vibrant flavor that’s hard to beat, but good-quality store-bought pesto can save time and still taste fantastic. Either works—choose based on your schedule and taste preference.
Can I make this recipe vegan-friendly?
Yes! Swap the Parmesan and mozzarella for your favorite plant-based cheeses and ensure your pesto is dairy-free or homemade without cheese. The olive oil and zucchini keep it flavorful and satisfying.
How spicy does the red pepper flakes make this dish?
Just a subtle warmth—nothing overwhelming. You can adjust or omit the red pepper flakes entirely based on how much heat you enjoy in your meals.
What temperature and bake time are best for tender zucchini?
375°F (190°C) is ideal for tenderizing zucchini without drying it out. Baking covered for 20-25 minutes followed by uncovered for 5-10 minutes gives you tender slices with a beautifully crisp cheese topping.
Final Thoughts
There’s something wonderfully satisfying about the Zucchini Pesto Bakes Recipe that feels both wholesome and indulgent, making it your next go-to dish for a cozy dinner or an impressive side. With its simple ingredients and straightforward steps, it invites you to embrace seasonal zucchini in a way that’s flavorful, cheesy, and utterly delightful. Give it a try—you might just find yourself reaching for zucchini more often once you’ve tasted this recipe’s magic!
Print
Zucchini Pesto Bakes Recipe
- Prep Time: 10 minutes
- Cook Time: 35 minutes
- Total Time: 45 minutes
- Yield: 4 servings
- Category: Casserole
- Method: Baking
- Cuisine: Italian
- Diet: Vegetarian
Description
Zucchini Pesto Bakes is a delicious and easy vegetarian casserole featuring layers of fresh zucchini rounds smothered in vibrant pesto sauce and topped with a melty blend of Parmesan and mozzarella cheeses. Baked to golden perfection, this dish is perfect as a comforting side or a light main course.
Ingredients
Vegetables
- 4 medium zucchini, sliced into rounds
Sauce & Seasonings
- 1/2 cup pesto sauce (store-bought or homemade)
- 1/4 tsp garlic powder
- 1/4 tsp red pepper flakes (optional)
- Salt and pepper to taste
Cheese
- 1/2 cup grated Parmesan cheese
- 1/2 cup shredded mozzarella cheese
Oils & Others
- 2 tbsp olive oil
- Fresh basil leaves for garnish (optional)
Instructions
- Preheat and Prepare Dish: Preheat the oven to 375°F (190°C). Grease a 9×9-inch baking dish with olive oil or cooking spray to prevent sticking.
- Layer Zucchini Slices: Arrange the zucchini slices in a single layer at the bottom of the prepared baking dish. Season evenly with salt, pepper, and garlic powder to enhance flavor.
- Add Pesto Sauce: Drizzle half of the pesto sauce over the zucchini slices, making sure to coat them evenly to infuse savory basil and garlic flavors.
- Sprinkle Cheese: Evenly sprinkle half of the grated Parmesan and shredded mozzarella cheeses over the pesto-coated zucchini layer to add richness and creaminess.
- Repeat Layers: Add another layer of zucchini slices, then spread the remaining pesto sauce on top. Follow by sprinkling the remaining Parmesan and mozzarella cheeses.
- Cover and Bake: Cover the baking dish with foil to trap moisture and bake for 20-25 minutes, or until the zucchini becomes tender and the cheese melts and bubbles.
- Uncover and Finish Baking: Remove the foil and continue baking for an additional 5-10 minutes until the top is golden brown and slightly crispy for added texture.
- Garnish and Serve: Garnish with fresh basil leaves if desired and serve hot. Enjoy your flavorful and cheesy Zucchini Pesto Bakes!
Notes
- This dish can be made with homemade pesto for a fresher taste or store-bought for convenience.
- Adjust red pepper flakes according to your heat preference or omit for a milder version.
- Use a mandoline slicer to ensure uniform zucchini slices for even baking.
- Leftovers can be refrigerated for up to 3 days and reheated in the oven for best texture.
- For a gluten-free version, ensure the pesto sauce is gluten-free.