Blackberry Lime Cheesecake Cupcakes Recipe
If you adore fruity desserts with a creamy, tangy twist, these Blackberry Lime Cheesecake Cupcakes will absolutely steal your heart. Each bite combines the lushness of cheesecake with the bright zest of lime and the sweet-tart burst of blackberries, all tucked into a perfectly portioned cupcake. This dessert is as beautiful as it is delicious, making it an irresistible treat for gatherings, celebrations, or any day you need a touch of brightness. Whether you’re a cheesecake enthusiast or just searching for a crowd-pleasing creation, these cupcakes are sure to become a new favorite!

Ingredients You’ll Need
Gathering your ingredients for Blackberry Lime Cheesecake Cupcakes is a breeze, but don’t let the simplicity fool you—each component brings a special flair. These aren’t just for flavor; they’re the building blocks behind the creamy texture, vibrant color, and unforgettable taste.
- Vanilla wafer cookies: Crisp cookies provide a perfect, fuss-free crust for every cupcake.
- Cream cheese (softened): The heart of the cheesecake, delivering creamy richness and tang.
- Granulated sugar: Sweetens the filling, highlighting the bright notes of lime and berry.
- Large eggs: Help bind the filling, giving it that classic, luscious structure.
- Vanilla extract: Adds subtle warmth and enhances the overall flavor profile.
- Zest and juice of 1 lime: Brings a zippy freshness and pairs perfectly with juicy blackberries.
- Sour cream: Lends extra silkiness and a gentle tang to the cheesecake base.
- All-purpose flour: Just a touch helps the cupcakes maintain their tender, creamy centers.
- Fresh blackberries: Bursts of color and flavor that turn each cupcake into a mini summer celebration.
- Blackberry jam: Intensifies the berry flavor and creates beautiful swirls.
- Powdered sugar: Sweetens the whipped cream topping for a silky finish.
- Heavy whipping cream (chilled): Whipped into clouds for that perfect, decadent topping.
How to Make Blackberry Lime Cheesecake Cupcakes
Step 1: Prep Your Pan and Oven
Begin by preheating your oven to 325°F (160°C) and lining a 12-cup muffin pan with paper liners. This step makes removing and serving your Blackberry Lime Cheesecake Cupcakes a snap, and it keeps cleanup to a minimum. Place one vanilla wafer at the bottom of each liner to form a crisp, no-fuss base.
Step 2: Make the Cheesecake Filling
In a large mixing bowl, beat the softened cream cheese and granulated sugar together until silky smooth and creamy, ensuring there are no lumps. Add eggs one at a time, mixing until just combined after each addition. Stir in the vanilla extract, lime zest, lime juice, sour cream, and flour, blending until all the elements are fully incorporated. The creamy filling should look glossy and have a hint of lime aroma—you’ll know you’re on the right track!
Step 3: Fill and Swirl
Divide the cheesecake batter evenly among your cupcake liners, filling each about three-quarters full. Now for the fun part: drop a small dollop of blackberry jam on top of each cupcake. Use a toothpick to gently swirl the jam into mesmerizing patterns. If you crave even more berry flavor, mash up a few fresh blackberries with the jam for extra bursts of fruitiness.
Step 4: Bake to Perfection
Bake the cupcakes in the preheated oven for 20 to 22 minutes. You’ll know they’re done when the centers are just set and no longer jiggle when gently shaken. Remove from the oven and let them cool completely in the pan—patience pays off here!
Step 5: Chill Thoroughly
Once cooled, refrigerate your BlackBerry Lime Cheesecake Cupcakes for at least 2 hours. This step ensures the cheesecakes are firm yet creamy, melded with all the zesty and fruity flavors.
Step 6: Whip Up the Topping
While the cupcakes chill, beat the chilled heavy whipping cream with powdered sugar until stiff peaks form. This whipped topping takes your cupcakes over the top—light, luscious, and just the right touch of sweetness.
Step 7: Decorate and Enjoy
Pipe or spread the whipped cream on each chilled cheesecake cupcake. Add a fresh blackberry and a light sprinkle of lime zest to each for a pop of color and a final flourish. Now, take a moment to admire your creations before digging in!
How to Serve Blackberry Lime Cheesecake Cupcakes

Garnishes
A plump, fresh blackberry and a sprinkle of vibrant lime zest are classic choices for these cupcakes, but you can elevate them with edible flowers, a drizzle of extra blackberry sauce, or candied lime slices. Each little touch makes your Blackberry Lime Cheesecake Cupcakes even more irresistible and photo-worthy.
Side Dishes
For a full dessert spread, pair these cupcakes with a bowl of fresh berries, a fruit salad, or a zesty lime sorbet. They also harmonize beautifully with coffee, tea, or a festive sparkling lemonade—anything that complements their creamy, fruity flair.
Creative Ways to Present
Serve your cupcakes on a tiered cake stand at parties, package them in clear boxes with ribbon for sweet gifts, or assemble them on a vibrant platter for a pop of color on any dessert table. Mini parchment wrappers or cupcake sleeves can add a bespoke, bakery-chic finish that makes each Blackberry Lime Cheesecake Cupcake stand out.
Make Ahead and Storage
Storing Leftovers
Store any leftover Blackberry Lime Cheesecake Cupcakes in an airtight container in the refrigerator. They’ll stay beautifully fresh, moist, and flavorful for up to 4 days, making them perfect for prepping ahead or snacking later.
Freezing
If you want to keep your cupcakes longer, freeze them (without the whipped cream topping) by wrapping each individually in plastic wrap and storing in a freezer-safe bag. They’ll taste delightful for up to 2 months; just thaw in the fridge before enjoying.
Reheating
These cheesecake cupcakes are best enjoyed chilled, so reheating isn’t necessary. If frozen, let them thaw overnight in the refrigerator, then top with fresh whipped cream and berries before serving.
FAQs
Can I use frozen blackberries instead of fresh?
Yes, you can use frozen blackberries! Just thaw them completely and gently blot dry with paper towels to avoid excess moisture in the cupcakes.
What if I don’t have blackberry jam?
Feel free to swap in raspberry or blueberry jam for a fun twist. The results are just as delicious, with a slightly different fruity flavor.
How do I know when the cheesecake cupcakes are set?
The centers should be just set and no longer jiggle when the pan is gently shaken. The edges might look firm, while the center remains slightly soft (it will set further as it cools).
Can I make these ahead for a party?
Absolutely! These Blackberry Lime Cheesecake Cupcakes are ideal for making ahead. Prepare and refrigerate up to 2 days in advance, then add whipped cream and garnishes just before serving.
Is it possible to make this recipe gluten-free?
Definitely. Use gluten-free vanilla wafers and swap the all-purpose flour for a 1:1 gluten-free baking mix, and your cupcakes will still come out tasting sensational.
Final Thoughts
If you’re searching for a dessert that’s both a showstopper and a comfort classic, you really can’t go wrong with Blackberry Lime Cheesecake Cupcakes. They pack sunshine, color, and joy into every little bite. Give them a try and watch your friends and family swoon—you’ll be asked for the recipe in no time!
Print
Blackberry Lime Cheesecake Cupcakes Recipe
- Total Time: 2 hours 45 minutes (including chilling)
- Yield: 12 cupcakes 1x
- Diet: Vegetarian
Description
Indulge in the delightful fusion of blackberries and lime with these decadent Blackberry Lime Cheesecake Cupcakes. Creamy cheesecake filling with a burst of fruity flavors in every bite, these mini treats are perfect for any occasion.
Ingredients
Cheesecake Cupcakes:
- 12 vanilla wafer cookies
- 16 ounces cream cheese, softened
- 3/4 cup granulated sugar
- 2 large eggs
- 1 teaspoon vanilla extract
- Zest and juice of 1 lime
- 1/4 cup sour cream
- 1 tablespoon all-purpose flour
Blackberry Swirl:
- 1 cup fresh blackberries
- 2 tablespoons blackberry jam
Whipped Cream Topping:
- 2 tablespoons powdered sugar
- 1/2 cup heavy whipping cream, chilled
Instructions
- Preheat and Prepare: Preheat the oven to 325°F (160°C) and line a 12-cup muffin pan with paper liners. Place a vanilla wafer at the bottom of each liner.
- Mix Cheesecake Batter: In a large bowl, beat cream cheese and sugar until smooth. Add eggs, one at a time, then mix in vanilla, lime zest, lime juice, sour cream, and flour.
- Fill and Swirl: Divide batter among liners, drop blackberry jam on each cupcake, swirl lightly with a toothpick.
- Bake and Chill: Bake for 20-22 minutes, cool in pan, then chill in the refrigerator for at least 2 hours.
- Whip Cream Topping: Whip cream and powdered sugar until stiff peaks form. Pipe or spread over cooled cheesecakes.
- Garnish and Serve: Top each cupcake with a fresh blackberry and a sprinkle of lime zest.
Notes
- For a stronger blackberry flavor, mash a few fresh blackberries into the jam before swirling.
- Best served chilled and can be stored in the refrigerator for up to 4 days.
- Prep Time: 20 minutes
- Cook Time: 22 minutes
- Category: Dessert
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 cupcake
- Calories: 240
- Sugar: 18 g
- Sodium: 150 mg
- Fat: 14 g
- Saturated Fat: 8 g
- Unsaturated Fat: 5 g
- Trans Fat: 0 g
- Carbohydrates: 23 g
- Fiber: 1 g
- Protein: 4 g
- Cholesterol: 55 mg